There is a link to PT's setup in the guide:
http://www.pokertracker.com/forum/viewtopic.php?t=6310
I've noticed some people like to paste incomplete hands to cut the action at specific points in the hand. With my hand poster and converter, you should paste the complete hand always. You can then use the "Stop Action At" drop down on the left to cut off the action at any point you want. You can also show or hide the Hero's last action. If you hide the Hero's action, it automatically creates a poll for viewers.
People are used to setting options before they post a hand, but my system works the opposite way. You should always post the complete hand first. Then you can use the options to set exactly what you want it to show.