I slightly modified HP's FPHG V0.x instrution to work with the new FPHG V2.01 setup (hope they make sense!):
1. Go to the folder where you installed FreePHG (eg: 'c:\program files\freephg\' and copy the file called 'FreePHG.exe' (or possibly just 'FreePHG') into the folder called 'C:\FreePHG_HandHistroies\' (this folder will ONLY appear after you have done some mining, but this is where the ".hhf" files are stored in FPHG V2.01).
2. Then you need to rename it to 'IntertopsPoker.exe' if the file you copied was called 'FreePHG.exe', else just rename it 'IntertopsPoker' if the file you copied was just called 'FreePHG'.
3. Then, you need to point pokertracker towards your intertopspoker.exe like so:
4. Then you open that file name, then click "OK" on the middle box, and you should be set.